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Bioinformatics
 
Plant Based Bioinformatics || ICT Developments
 
 
 
NBRI BIOINFORMATICS (NBRI-BC)
 
Background
 

NBRI was the first organization in the country to initiate development of plant diversity databases in collaboration with University of Southampton & Royal Botanic Gardens, Kew, UK. NBRI signed an agreement with ILDIS to act as the Centre for South Asia to undertake the development of database of Legumes of South Asia.

In 1996, the-then VP, CSIR (Prof. Y.K. Alagh) desired a base paper on the International Legume Database and Information Services (ILDIS) programme from NBRI. NBRI prepared the base paper and the-then Director (Dr. P.V. Sane), submitted a detailed plan for development of legume database of South Asia under the aegis of International Legume Database and Information Service (ILDIS), UK and upgrading the legume database with new Phase II modules on as per international standards. This base paper was circulated by DG, CSIR and comments were invited from biological labs of CSIR and other GOI departments.

Based on the comments received and realizing the importance of this international programme, the-then VP, CSIR discussed the programme details with Secretaries of GOI and finally approved a proposal to take up this programme at national level jointly by DBT and CSIR by establishing a Bioinformatics Centre at NBRI under DBT‘s Network programme (BTISNet).

Subsequently, DBT approved the programme and a grant of Rs. 25.00 Lakhs in August 1998, with a commitment of Rs. 5.00 Lakhs p.a. from CSIR for recurring expenditure for this programme. Research council (RC) of NBRI approved only the creation of the Bioinformatics Centre for DBT sponsored ILDIS South Asia Programme. Secretary, DBT nominated Dr. S. Kumar, Coordinator of NBRI Bioinformatics Centre (NBRI-BC).

The work of setting up the centre could not be taken up from 01.01.98 to 23.02.99 due to long absence of a regular Director at NBRI and lack of emphasis on this area by the–then Director Incharge, Dr. Sushil Kumar, and hence no significant progress could be done.

The first initiative was taken up in this regard and a meeting was organized on 16.02.99 at NBPGR, New Delhi and several recommendations were made in the presence of Dr. P. Pushpangadan, Director, NBRI and thus the work of establishment of Bioinformatics was initiated.

Dr. P. Pushpangadan, assumed the charge of Director, NBRI on 24th February 1999 and promoted the development of various R&D programmes and finally gave a momentum to the activities of Bioinformatics.
 

NBRI-BC infrastructure inaugurated by
Dr. R. A. Mashelkar, DG, CSIR on 21st July 2001
 
NBRI-BC is involved in plant based Bioinformatics which may be defined as the branch of information technology dealing with all aspects of biological systems and associated scientific and technological information/ data including the traditional knowledge systems-'data mining', with the aim of conservation and sustainable utilization that converts bioresources into economic wealth. It thus involves information pertaining to biological resources, inventory documentation, acquisition, processing, storage, distribution, analysis and interpretation, that combines the tools and techniques of mathematics, computer science and biology with the aim of understanding the biological significance of a variety of data.

NBRI-BC researches biodiversity informatics. It is involved in various research activities at regional, national and international level such as-
 
  1. Providing stimulus to biodiversity informatics, by initiating database standards, software production, development of biodiversity (plant genetic) resource databases and bringing bioinformatics to many traditional biotechnologists, botanists and several other institutions of India.
  2. Facilitating the study and conservation of Indian biodiversity by the development and maintenance of plant species diversity database. This includes:
    • To establish a database, network and website of Indian Botanic Gardens (www.ibgn.org).
    • To develop a comprehensive database of all Indian plants on Internet (www.plantsofindia.org).
    • To update and upgrade the Legume database of South Asia, in collaboration with ILDIS, UK. (www.ildis.org).
    • To establish a herbarium database and network the herbaria of India.
    • To establish database of oral traditions under TKDL of CSIR.

  3. Functioning as the national node for Global Biodiversity Information Facility (GBIF).
  4. Functioning as the Technical Centre for Asia Pacific Traditional Medicine Network (APTMNET).
 
NBRI-BC is thus a unique centre in the country that is undertaking research programmes on plant based Bioinformatics and establishing linkages with several programmes at national and international level.